STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD75547.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (221 aa)    
Predicted Functional Partners:
SFD75633.1
Formate dehydrogenase.
   
 0.999
SFF36120.1
Amino acid adenylation domain-containing protein.
  
 0.896
SFE78669.1
4Fe-4S binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
 0.888
SFF36086.1
Amino acid adenylation domain-containing protein.
  
 0.883
SFF14161.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
   
 0.858
SFD57656.1
NADH dehydrogenase subunit N.
   
 0.773
SFD85457.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.772
SFF28801.1
Deoxyadenosine/deoxycytidine kinase.
   
 0.711
SFD51642.1
Rieske Fe-S protein.
  
 0.676
SFD74698.1
Glycine/D-amino acid oxidase.
  
 0.676
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.