STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD75984.1Putative peptide maturation system protein. (353 aa)    
Predicted Functional Partners:
SFD75970.1
Hypothetical protein.
 
   
 0.905
SFF34004.1
Hypothetical protein.
  
     0.724
SFD67069.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
  
   0.660
SFD86238.1
Calcineurin-like phosphoesterase.
  
   
 0.596
SFF47176.1
Flp pilus assembly protein TadD, contains TPR repeats.
 
 
 
 0.586
SFF22126.1
RimK-like ATP-grasp domain-containing protein.
 
   
 0.482
SFE77275.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
     0.470
SFE70697.1
Uncharacterized membrane protein.
  
     0.459
SFD75658.1
Hypothetical protein.
  
 
   0.443
SFE93791.1
Hypothetical protein.
  
     0.441
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.