STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD78949.1Thioredoxin reductase. (308 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.822
SFD74577.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.788
SFD83572.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.788
SFE08720.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.743
SFE21491.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
    
  0.691
SFD82668.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.666
SFD59517.1
Monothiol glutaredoxin.
  
 
 0.604
SFE62271.1
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 
 0.604
SFE29112.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.601
SFE60572.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.601
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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