STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD85263.1Membrane protein involved in the export of O-antigen and teichoic acid. (496 aa)    
Predicted Functional Partners:
SFF24466.1
Glycosyl transferases group 1.
  
 
 0.921
SFF24478.1
UDP-galactopyranose mutase.
  
 
 0.921
SFE65820.1
UDP-glucose dehydrogenase.
  
  
 0.805
SFD85247.1
Hypothetical protein.
       0.786
SFE29151.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
     
 0.781
SFD85199.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.766
SFD85276.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.757
SFD66745.1
UDP-N-Acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.702
SFD73474.1
Capsular exopolysaccharide family.
 
  
 0.677
SFD85213.1
Glucose-1-phosphate cytidylyltransferase.
 
  
 0.676
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.