STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD86888.1geranyl-CoA carboxylase alpha subunit. (664 aa)    
Predicted Functional Partners:
SFD86929.1
geranyl-CoA carboxylase beta subunit.
 0.997
SFE98211.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 
 0.993
SFD86921.1
citronellyl-CoA dehydrogenase.
  
  0.954
SFF16191.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 0.936
accD
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 0.932
SFF36086.1
Amino acid adenylation domain-containing protein.
  
 
 0.884
SFE02550.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.882
SFF36120.1
Amino acid adenylation domain-containing protein.
  
 
 0.880
SFD86897.1
isohexenylglutaconyl-CoA hydratase.
 
  0.874
SFE40264.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.874
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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