STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD87915.1Hypothetical protein. (565 aa)    
Predicted Functional Partners:
SFD87921.1
Hypothetical protein.
 
     0.893
SFE95221.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
   0.810
SFD83434.1
Myxococcales GC_trans_RRR domain-containing protein/MYXO-CTERM domain-containing protein.
  
     0.685
SFE25266.1
Hypothetical protein.
  
     0.671
SFF07293.1
Hypothetical protein.
  
     0.663
SFF00923.1
Hypothetical protein.
  
     0.654
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.639
SFF22114.1
HlyD family secretion protein.
  
     0.631
SFE72446.1
HlyD family secretion protein.
  
     0.606
SFE98056.1
TPR repeat-containing protein.
 
    0.594
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.