STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD87921.1Hypothetical protein. (796 aa)    
Predicted Functional Partners:
SFD87915.1
Hypothetical protein.
 
     0.893
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.788
SFF00728.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
   
 
  0.785
SFD83434.1
Myxococcales GC_trans_RRR domain-containing protein/MYXO-CTERM domain-containing protein.
  
     0.764
SFE25266.1
Hypothetical protein.
  
     0.760
SFF00923.1
Hypothetical protein.
  
     0.759
SFF07293.1
Hypothetical protein.
  
     0.757
SFD93366.1
Hypothetical protein.
  
     0.756
SFF19819.1
SIR2-like domain-containing protein.
  
     0.730
SFF22690.1
AraC-type DNA-binding protein.
  
     0.687
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.