STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD93943.1Protein of unknown function. (584 aa)    
Predicted Functional Partners:
SFD93924.1
Hypothetical protein.
       0.773
SFD82668.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.647
SFD93908.1
Hypothetical protein.
       0.501
SFD93958.1
Hypothetical protein.
       0.500
SFD59387.1
Tetratricopeptide repeat-containing protein.
  
    0.466
SFF07218.1
PH domain-containing protein.
  
    0.466
SFD52886.1
Bacterioferritin.
   
    0.445
SFE00516.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
    0.445
SFE70742.1
Hypothetical protein.
  
    0.430
SFE55314.1
Cytochrome c2.
  
 
 
 0.401
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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