STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD99768.1Glycosyltransferase involved in cell wall bisynthesis. (289 aa)    
Predicted Functional Partners:
SFD99790.1
O-antigen ligase like membrane protein.
  
  
 0.797
SFD99751.1
Macrocin-O-methyltransferase (TylF).
       0.775
SFE16366.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
     
 0.742
SFD94771.1
NAD(P)H-flavin reductase.
  
  
  0.715
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.658
SFD99731.1
Hypothetical protein.
       0.558
SFD99826.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
 
     0.557
SFF36120.1
Amino acid adenylation domain-containing protein.
  
 0.544
SFF36086.1
Amino acid adenylation domain-containing protein.
  
 0.525
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
 0.515
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (20%) [HD]