STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selAL-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (454 aa)    
Predicted Functional Partners:
SFE08426.1
Selenophosphate synthase.
 
  
 0.965
SFE08444.1
Selenocysteine-specific elongation factor.
  
 0.880
SFD57577.1
seryl-tRNA synthetase.
     
 0.839
SFE08515.1
FHA domain-containing protein.
 
     0.805
SFE08533.1
Competence protein.
       0.773
SFD91740.1
Phosphocarrier protein.
     
 0.653
SFD91754.1
PTS system, mannose-specific IIA component.
    
  0.606
SFE01870.1
Entner-Doudoroff aldolase.
    
  0.606
SFD65656.1
Transcriptional regulator, XRE family /PTS IIA-like nitrogen-regulatory protein PtsN.
    
  0.599
SFF28525.1
Acylphosphatase.
     
 0.597
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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