STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE26079.1Vault protein inter-alpha-trypsin domain-containing protein. (1024 aa)    
Predicted Functional Partners:
SFD85506.1
Calcineurin-like phosphoesterase.
  
     0.774
SFE07323.1
Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain.
  
     0.768
SFE49116.1
FecR family protein.
  
     0.763
SFF03881.1
Surface antigen.
  
     0.758
SFF12242.1
Tetratricopeptide repeat-containing protein.
  
     0.757
SFE12485.1
Tetratricopeptide repeat-containing protein.
  
     0.753
SFE03838.1
Hypothetical protein.
  
     0.748
SFD68904.1
Uncharacterized protein, contains caspase domain.
 
     0.745
SFE26072.1
Hypothetical protein.
       0.741
SFD55475.1
Murein endopeptidase.
  
     0.738
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.