STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE26946.1Biopolymer transport protein TolR. (148 aa)    
Predicted Functional Partners:
SFE26994.1
Outer membrane transport energization protein ExbB.
 
 0.938
SFF10055.1
Cell division and transport-associated protein TolQ.
 
 0.912
SFD98368.1
Outer membrane transport energization protein ExbB.
 
 0.878
SFD86254.1
Outer membrane receptor proteins, mostly Fe transport.
  
 0.863
SFE83615.1
TonB family C-terminal domain-containing protein.
  
 0.863
SFE83659.1
Outer membrane transport energization protein ExbB.
 
 0.858
SFF16525.1
Outer membrane transport energization protein ExbB.
 
 0.825
SFD98383.1
TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 0.764
SFD92672.1
Hypothetical protein.
  
 0.763
SFE00375.1
TonB-dependent Receptor Plug Domain.
  
 0.763
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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