STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE26971.1Biopolymer transport protein TolR. (174 aa)    
Predicted Functional Partners:
SFE26994.1
Outer membrane transport energization protein ExbB.
 
 0.974
SFF10055.1
Cell division and transport-associated protein TolQ.
 
 0.914
SFD86254.1
Outer membrane receptor proteins, mostly Fe transport.
  
 0.863
SFE83615.1
TonB family C-terminal domain-containing protein.
  
 0.863
SFD98368.1
Outer membrane transport energization protein ExbB.
 
 0.858
SFE83659.1
Outer membrane transport energization protein ExbB.
 
 0.815
SFE27012.1
TonB family C-terminal domain-containing protein.
  
 0.810
SFF16525.1
Outer membrane transport energization protein ExbB.
 
 0.785
SFE13095.1
Biopolymer transport protein TolR.
 
     0.774
SFF10090.1
TolB protein.
 
  
 0.769
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.