STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE32272.1ABC-2 type transport system ATP-binding protein. (294 aa)    
Predicted Functional Partners:
SFE32249.1
ABC-2 type transport system permease protein.
 
  
 0.956
SFE32288.1
Transcriptional regulator, TetR family.
 
     0.867
SFF31054.1
ABC-2 type transport system permease protein.
  
 0.776
SFF14523.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family /carbohydrate ABC transporter membrane protein 1, CUT1 family.
    
 0.748
cysN
Adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.713
SFF10126.1
ABC-type multidrug transport system, ATPase component.
 
  
 0.640
SFD64274.1
His Kinase A (phospho-acceptor) domain-containing protein.
    
 0.586
SFD77461.1
Parallel beta-helix repeat-containing protein.
  
 0.582
SFD51433.1
ABC-2 type transport system permease protein.
  
 0.581
SFD51449.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 0.581
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.