STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE33583.1rsbT co-antagonist protein RsbR. (277 aa)    
Predicted Functional Partners:
SFE53730.1
Serine/threonine-protein kinase RsbT.
 
 0.896
SFE53844.1
Serine/threonine-protein kinase RsbT.
 
  0.889
SFE53755.1
Negative regulator of sigma-B (phosphoserine phosphatase).
 
  0.876
SFF10126.1
ABC-type multidrug transport system, ATPase component.
   
  0.850
SFE53788.1
rsbT antagonist protein RsbS.
 
 
   0.838
SFF07014.1
rsbT antagonist protein RsbS.
 
 
   0.838
SFD93617.1
Signal transduction histidine kinase.
  
 
  0.797
SFF06702.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.775
SFE43613.1
PAS domain S-box-containing protein.
  
 
 0.744
SFE50028.1
PAS domain S-box-containing protein.
  
 
 0.732
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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