STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE35265.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)    
Predicted Functional Partners:
SFF19374.1
Amino acid adenylation domain-containing protein.
 
 
 0.947
SFE73808.1
Thioester reductase domain-containing protein.
   
  0.911
SFE78240.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
   
  0.911
SFF36110.1
Amino acid adenylation domain-containing protein.
 
 
  0.909
SFE85654.1
L-prolyl-[peptidyl carrier protein] synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 
  0.907
SFF36086.1
Amino acid adenylation domain-containing protein.
  
 
 0.865
SFF36120.1
Amino acid adenylation domain-containing protein.
  
 0.837
SFF12789.1
4-aminobutyrate aminotransferase.
  
 
 0.831
SFE85764.1
Ketoacyl-synthetase C-terminal extension.
  
 
 0.749
SFE35285.1
Transcriptional regulator, AraC family.
 
     0.663
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.