STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE39926.1Endonuclease V. (164 aa)    
Predicted Functional Partners:
SFE39945.1
Hypothetical protein.
       0.727
SFF49418.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
  
     0.705
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
    0.606
SFE39963.1
Hypothetical protein.
       0.585
SFE55570.1
Hypothetical protein.
  
     0.510
SFF36003.1
Hypothetical protein.
  
     0.494
SFD84484.1
VWA domain containing CoxE-like protein.
  
     0.481
SFD46716.1
Hypothetical protein.
  
     0.465
SFE35634.1
Hypothetical protein.
  
     0.452
SFD84497.1
MoxR-like ATPase.
  
     0.444
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.