STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE40502.1Hypothetical protein. (660 aa)    
Predicted Functional Partners:
SFD86639.1
Hypothetical protein.
  
     0.744
SFF50673.1
Hypothetical protein.
  
     0.731
SFE34079.1
Hypothetical protein.
  
     0.718
SFD78677.1
Putative metal-binding motif-containing protein.
  
  
  0.690
SFD52351.1
Lectin C-type domain-containing protein.
  
     0.687
SFF14486.1
Maltoporin (phage lambda and maltose receptor).
  
     0.678
SFF38245.1
Hypothetical protein.
  
     0.650
SFF04691.1
Myxococcus cysteine-rich repeat-containing protein.
  
     0.645
SFE55570.1
Hypothetical protein.
  
     0.635
SFE36728.1
Hypothetical protein.
  
     0.608
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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