STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE43059.1ATP-dependent protease La (LON) substrate-binding domain-containing protein. (238 aa)    
Predicted Functional Partners:
SFE27170.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
    
 0.728
SFE47176.1
E2 family protein B.
    
 0.728
SFF00567.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
    
 0.728
SFE98370.1
Putative mRNA 3-end processing factor.
     
 0.689
SFE43021.1
GTP cyclohydrolase I.
       0.576
SFE09825.1
ATP-dependent RNA helicase SUPV3L1/SUV3.
  
     0.543
SFE43036.1
Probable phosphoglycerate mutase.
       0.536
SFE00764.1
DNA repair exonuclease SbcCD nuclease subunit.
  
 
  0.435
SFD52111.1
Hypothetical protein.
    
 0.432
SFE12485.1
Tetratricopeptide repeat-containing protein.
    
 0.432
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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