STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE54128.1Transporter, YbiR family. (410 aa)    
Predicted Functional Partners:
SFE06714.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.577
SFF28489.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.545
SFF14183.1
Arsenate reductase; Belongs to the ArsC family.
    
 0.459
SFE07901.1
Arsenite efflux ATP-binding protein ArsA.
    
 0.418
SFE07937.1
Arsenite efflux ATP-binding protein ArsA.
    
 0.418
SFE54107.1
Small conductance mechanosensitive channel.
       0.412
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.