STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE54305.1AraC-type DNA-binding protein. (283 aa)    
Predicted Functional Partners:
SFE54321.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
       0.752
SFE54341.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
       0.678
SFE54358.1
Pyruvate dehydrogenase E1 component alpha subunit.
       0.678
SFE54284.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
    0.648
SFE81780.1
Glyoxalase-like domain-containing protein.
  
    0.527
SFE54262.1
Hypothetical protein.
       0.498
SFD77083.1
Hypothetical protein.
     
 0.494
SFF31518.1
HAMP domain-containing protein.
     
 0.494
SFF46358.1
Signal transduction histidine kinase.
     
 0.494
SFE12653.1
Glyoxalase-like domain-containing protein.
  
    0.459
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.