STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE63047.1Penicillin-binding protein 1C. (800 aa)    
Predicted Functional Partners:
SFE63030.1
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family.
 
   
 0.895
SFD45510.1
Penicillin-binding protein 1A.
  
  
0.859
SFD52016.1
Penicillin-binding protein 1A.
  
  
0.857
SFD52045.1
Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
  
  
0.854
SFE81893.1
Penicillin-binding protein 2.
  
  
 0.806
SFD85893.1
Cell division protein FtsI (penicillin-binding protein 3).
  
  
 0.751
SFF05911.1
Hypothetical protein.
 
   
 0.726
SFD56050.1
Hypothetical protein.
 
   
 0.671
SFD58621.1
Penicillin binding protein transpeptidase domain-containing protein.
     
 0.613
SFD57541.1
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family.
   
 
 0.596
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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