STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE64875.1Transposase. (111 aa)    
Predicted Functional Partners:
SFE64886.1
Transposase InsO and inactivated derivatives.
 
  
 0.955
SFF46173.1
Transposase InsO and inactivated derivatives.
 
  
 0.794
SFF44709.1
Integrase core domain-containing protein.
 
  
 0.738
SFE64864.1
Hypothetical protein.
       0.732
SFF47124.1
Integrase core domain-containing protein.
 
  
 0.711
SFF36175.1
Transposase, Mutator family; Required for the transposition of the insertion element.
 
   
 0.593
SFF51396.1
Hypothetical protein.
  
     0.493
SFE64902.1
Hypothetical protein.
       0.461
SFE64917.1
Myxococcus cysteine-rich repeat-containing protein.
       0.461
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.