STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE65020.1HAMP domain-containing protein. (481 aa)    
Predicted Functional Partners:
SFE65036.1
Two-component system, OmpR family, response regulator RegX3.
 0.960
SFF31518.1
HAMP domain-containing protein.
 0.959
SFD93617.1
Signal transduction histidine kinase.
 
 
 0.953
SFE47018.1
PAS domain S-box-containing protein.
 
0.926
SFE21050.1
Signal transduction histidine kinase.
 
0.925
SFF39874.1
CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
 
 0.918
SFF00881.1
Signal transduction histidine kinase.
 
 
0.914
SFF27787.1
Signal transduction histidine kinase.
 
 
0.914
SFD77083.1
Hypothetical protein.
 
0.908
SFF46358.1
Signal transduction histidine kinase.
 
0.907
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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