STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE65089.1Uncharacterized conserved protein YndB, AHSA1/START domain. (169 aa)    
Predicted Functional Partners:
SFE65115.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
 
     0.813
SFE65102.1
Transcriptional regulator, ArsR family.
 
    0.812
SFE65078.1
Hypothetical protein.
       0.746
SFD86714.1
Hypothetical protein.
  
     0.726
SFE17042.1
Alpha/beta hydrolase family protein.
  
     0.707
SFF22371.1
Phosphoinositide phospholipase C, Ca2+-dependent.
  
     0.688
SFD75927.1
Phosphoinositide phospholipase C, Ca2+-dependent.
  
     0.675
SFF32732.1
HEAT repeat.
  
     0.653
SFF19225.1
MYXO-CTERM domain-containing protein.
  
     0.640
SFE91805.1
Shoulder domain-containing protein.
  
     0.636
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.