STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE68298.1Repeat domain-containing protein. (649 aa)    
Predicted Functional Partners:
SFF41774.1
Hypothetical protein.
  
  
  0.736
SFE29432.1
Hypothetical protein.
  
  
  0.721
SFF36425.1
Fibro-slime domain-containing protein.
  
 
  0.691
SFE03775.1
Fibro-slime domain-containing protein.
  
 
  0.684
SFD76064.1
Fibro-slime domain-containing protein.
  
 
  0.669
SFD48305.1
Cytosine/adenosine deaminase.
  
  
  0.663
SFE60706.1
ATP-binding cassette, subfamily B.
  
 
  0.630
SFF28874.1
Fibro-slime domain-containing protein.
  
  
  0.614
SFF38105.1
Repeat domain-containing protein.
  
     0.614
SFD93724.1
Hypothetical protein.
  
     0.606
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.