STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE71628.1His Kinase A (phospho-acceptor) domain-containing protein. (481 aa)    
Predicted Functional Partners:
SFE43613.1
PAS domain S-box-containing protein.
 
 
 0.955
SFD77083.1
Hypothetical protein.
  
0.954
SFF31518.1
HAMP domain-containing protein.
  
 0.954
SFF46358.1
Signal transduction histidine kinase.
  
0.954
SFD93617.1
Signal transduction histidine kinase.
 
 0.939
SFF00881.1
Signal transduction histidine kinase.
 
 
0.933
SFF27787.1
Signal transduction histidine kinase.
 
 
0.933
SFE73719.1
Signal transduction histidine kinase.
 
 
0.919
SFE47018.1
PAS domain S-box-containing protein.
 
0.915
SFF48439.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.871
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.