STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE75691.1Protein of unknown function. (473 aa)    
Predicted Functional Partners:
SFE75714.1
Protein of unknown function.
 
     0.946
SFD65891.1
Protein of unknown function.
  
     0.775
SFD77656.1
Protein of unknown function.
  
     0.775
SFD90194.1
Ca-dependent carbohydrate-binding module xylan-binding.
  
     0.775
SFE15873.1
Protein of unknown function.
  
     0.775
SFE46643.1
Protein of unknown function.
  
     0.775
SFE76410.1
Protein of unknown function.
  
     0.775
SFE87150.1
Protein of unknown function.
  
     0.775
SFF01359.1
Protein of unknown function.
  
     0.775
SFF06590.1
Protein of unknown function.
  
     0.775
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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