STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE76204.1CotH protein. (468 aa)    
Predicted Functional Partners:
SFF40959.1
Glycosyl transferase family 2.
  
     0.639
SFF03881.1
Surface antigen.
  
     0.614
SFE90911.1
SPFH domain / Band 7 family protein.
  
     0.582
SFE76242.1
Protein of unknown function.
 
     0.571
SFF00923.1
Hypothetical protein.
  
     0.536
SFF09013.1
NADPH:quinone reductase.
  
     0.531
SFE97391.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.526
SFD83434.1
Myxococcales GC_trans_RRR domain-containing protein/MYXO-CTERM domain-containing protein.
  
     0.484
SFE72446.1
HlyD family secretion protein.
  
     0.482
SFF22114.1
HlyD family secretion protein.
  
     0.474
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.