STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE77758.1FG-GAP repeat-containing protein. (635 aa)    
Predicted Functional Partners:
SFD98211.1
Ricin-type beta-trefoil lectin domain-like.
  
 
  0.550
SFF36497.1
Hypothetical protein.
 
 
  0.525
SFE67517.1
Glycosyl hydrolase family 45.
  
     0.483
SFE78160.1
Phosphoinositide phospholipase C, Ca2+-dependent.
  
     0.478
SFE77779.1
ABC transporter.
       0.471
SFF35254.1
Protein of unknown function.
  
 
  0.466
SFE75714.1
Protein of unknown function.
  
 
  0.464
SFE15873.1
Protein of unknown function.
  
 
  0.463
SFF20654.1
Protein of unknown function.
  
 
  0.462
SFE76410.1
Protein of unknown function.
  
 
  0.461
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.