STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE80995.1Myxococcus cysteine-rich repeat-containing protein. (384 aa)    
Predicted Functional Partners:
SFE53473.1
Myxococcus cysteine-rich repeat-containing protein.
  
     0.775
SFE81013.1
Myxococcus cysteine-rich repeat-containing protein.
 
    
0.639
SFF49008.1
Myxococcus cysteine-rich repeat-containing protein.
  
     0.630
SFD55722.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
  
     0.622
SFD51017.1
Hypothetical protein.
  
     0.617
SFE46442.1
Hypothetical protein.
  
     0.608
SFD95219.1
Protein of unknown function.
  
     0.603
SFF18012.1
Hypothetical protein.
  
     0.599
SFF02889.1
Hypothetical protein.
  
     0.571
SFD51081.1
Hypothetical protein.
  
     0.568
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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