STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE82444.1Signal transducer regulating beta-lactamase production, contains metallopeptidase domain. (854 aa)    
Predicted Functional Partners:
SFE82427.1
Predicted transcriptional regulator.
 
 
 0.964
SFF32030.1
Predicted transcriptional regulator.
 
 
 0.860
SFF11128.1
Predicted transcriptional regulator.
 
 
 0.856
SFF12691.1
Predicted transcriptional regulator.
 
 
 0.843
SFF12700.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
  
  0.838
SFE40264.1
2-oxoisovalerate dehydrogenase E1 component.
   
 
  0.536
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.495
SFE66205.1
Serine/threonine protein kinase.
    
  0.494
SFF38028.1
Hypothetical protein.
  
  
  0.471
SFD54197.1
Beta-lactamase class D.
 
  
  0.470
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.