STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE83102.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (419 aa)    
Predicted Functional Partners:
SFF41701.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.754
SFD77397.1
DNA translocase FtsK.
  
   
 0.647
recR
DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
   
 0.535
SFF26066.1
comF family protein.
   
    0.483
SFD55614.1
Chromosome segregation ATPase.
 
   
 0.481
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.471
SFD55635.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.464
SFF06382.1
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
   
  
 0.435
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.