STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE85222.1Type VI secretion system protein ImpC. (480 aa)    
Predicted Functional Partners:
SFE80873.1
Type VI secretion system protein ImpB.
 0.996
SFE80846.1
Type VI secretion system secreted protein Hcp.
 
 0.986
SFE85257.1
Type VI secretion system protein ImpK.
 
  
 0.984
SFE85236.1
Type VI protein secretion system component VasK.
 
 
 0.983
SFE85268.1
Type VI secretion system protein ImpJ.
 
 0.982
SFE85206.1
ImpA, N-terminal, type VI secretion system.
 
 
 0.970
SFE85406.1
Type VI secretion system protein ImpG.
  
 0.935
SFE85391.1
Type VI secretion system protein ImpH.
 
 
 0.930
SFE54855.1
Predicted component of the type VI protein secretion system.
  
 0.925
SFE80831.1
Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family.
 0.894
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.