STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE89420.1Delta-9 acyl-phospholipid desaturase. (266 aa)    
Predicted Functional Partners:
SFD94771.1
NAD(P)H-flavin reductase.
     
 0.777
SFE86655.1
Hypothetical protein.
     
 0.777
SFE89437.1
WD40-like Beta Propeller Repeat.
       0.510
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.444
SFE89406.1
Hypothetical protein.
       0.444
SFF36120.1
Amino acid adenylation domain-containing protein.
  
 
 0.431
SFD83477.1
Hypothetical protein.
  
     0.421
SFE85764.1
Ketoacyl-synthetase C-terminal extension.
   
 0.419
SFF14161.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
 0.419
SFF36086.1
Amino acid adenylation domain-containing protein.
  
 
 0.405
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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