STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00275338Deg-1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (855 aa)    
Predicted Functional Partners:
WBGene00110069
Mec-2.
    
 0.756
WBGene00093680
Uncharacterized protein.
    
 0.754
WBGene00104428
Uncharacterized protein.
    
 0.754
WBGene00099227
Transcription factor BTF3; Belongs to the NAC-beta family.
    
 0.688
WBGene00099275
Transcription factor BTF3.
    
 0.688
WBGene00111326
PHB domain-containing protein.
    
 0.667
WBGene00106982
Sto-2.
    
 0.655
WBGene00274409
Trp-4; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.602
WBGene00276805
PHB domain-containing protein.
    
 0.601
WBGene00276584
Yap-1.
    
 0.593
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.