TEA_005169 protein (Camellia sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TEA_005169

PX domain-containing protein. (146 aa)

Predicted Functional Partners:

TEA_023083

0.819

TEA_021507

0.750

TEA_015194

0.706

TEA_016884

0.706

TEA_010980

0.706

TEA_007145

0.641

TEA_026495

0.635

TEA_021259

0.635

TEA_000415

0.635

TEA_029943

0.635

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_000415	TEA_005169	A0A4S4E745	A0A4S4DLB8	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	PX domain-containing protein.	0.635
TEA_000415	TEA_007145	A0A4S4E745	A0A4V3WQX7	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Adaptin_N domain-containing protein.	0.952
TEA_005169	TEA_000415	A0A4S4DLB8	A0A4S4E745	PX domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.635
TEA_005169	TEA_007145	A0A4S4DLB8	A0A4V3WQX7	PX domain-containing protein.	Adaptin_N domain-containing protein.	0.641
TEA_005169	TEA_010980	A0A4S4DLB8	A0A4V3WQ74	PX domain-containing protein.	NADPH_Ox domain-containing protein.	0.706
TEA_005169	TEA_015194	A0A4S4DLB8	A0A4S4D6D1	PX domain-containing protein.	Uncharacterized protein.	0.706
TEA_005169	TEA_016884	A0A4S4DLB8	A0A4S4DDT0	PX domain-containing protein.	Uncharacterized protein.	0.706
TEA_005169	TEA_021259	A0A4S4DLB8	A0A4S4DKQ7	PX domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.635
TEA_005169	TEA_021507	A0A4S4DLB8	A0A4S4DGB0	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.750
TEA_005169	TEA_023083	A0A4S4DLB8	A0A4S4DFJ8	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.819
TEA_005169	TEA_026495	A0A4S4DLB8	A0A4S4CX91	PX domain-containing protein.	RanBD1 domain-containing protein.	0.635
TEA_005169	TEA_029943	A0A4S4DLB8	A0A4V3WQY1	PX domain-containing protein.	Uncharacterized protein.	0.635
TEA_007145	TEA_000415	A0A4V3WQX7	A0A4S4E745	Adaptin_N domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.952
TEA_007145	TEA_005169	A0A4V3WQX7	A0A4S4DLB8	Adaptin_N domain-containing protein.	PX domain-containing protein.	0.641
TEA_007145	TEA_021259	A0A4V3WQX7	A0A4S4DKQ7	Adaptin_N domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.952
TEA_007145	TEA_026495	A0A4V3WQX7	A0A4S4CX91	Adaptin_N domain-containing protein.	RanBD1 domain-containing protein.	0.952
TEA_007145	TEA_029943	A0A4V3WQX7	A0A4V3WQY1	Adaptin_N domain-containing protein.	Uncharacterized protein.	0.952
TEA_010980	TEA_005169	A0A4V3WQ74	A0A4S4DLB8	NADPH_Ox domain-containing protein.	PX domain-containing protein.	0.706
TEA_010980	TEA_021507	A0A4V3WQ74	A0A4S4DGB0	NADPH_Ox domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.977
TEA_010980	TEA_023083	A0A4V3WQ74	A0A4S4DFJ8	NADPH_Ox domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.977