STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_006504Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (696 aa)    
Predicted Functional Partners:
DD237_000510
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.983
DD237_007256
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.963
DD237_004721
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
  
 
 0.937
DD237_000844
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 0.935
DD238_002526
Uncharacterized protein.
  
 
 0.931
DD237_001649
Triosephosphate isomerase.
  
 0.931
DD237_003018
Uncharacterized protein.
   
 0.929
DD237_005898
Pribosyltran_N domain-containing protein.
   
 
 0.923
DD237_000458
Pribosyltran_N domain-containing protein.
   
 
 0.923
DD238_005417
Uncharacterized protein.
  
 
 0.922
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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