STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cofC2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. (231 aa)    
Predicted Functional Partners:
cofD
LPPG domain protein containing protein; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
  
 0.968
Htur_1893
tRNA-dihydrouridine synthase-like protein; KEGG: cvi:CV_0544 regulatory gene required to sense and relay the nitrogen status.
 
     0.739
Htur_3777
Conserved hypothetical protein.
  
     0.735
Htur_2119
PFAM: phosphoesterase RecJ domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dat:HRM2_01850 RecJ-like exonuclease (DnaJ- type Zn finger protein).
  
     0.726
Htur_2986
Hypothetical protein.
  
     0.719
Htur_2957
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: geo:Geob_1424 oligosaccharyl transferase STT3 subunit.
  
     0.718
Htur_0819
PFAM: amino acid-binding ACT domain protein; KEGG: abb:ABBFA_000676 threonine dehydratase.
  
     0.715
Htur_2443
PFAM: Protein of unknown function DUF555; KEGG: DHR1/Ecm16p/kurz. HrpA family SFII helicase; Belongs to the UPF0212 family.
  
     0.714
Htur_2269
PFAM: Protein of unknown function DUF293; Helix- turn-helix type 11 domain protein; protein of unknown function UPF0074.
  
     0.710
Htur_2046
Conserved hypothetical protein.
  
     0.703
Your Current Organism:
Haloterrigena turkmenica
NCBI taxonomy Id: 543526
Other names: H. turkmenica DSM 5511, Haloterrigena turkmenica ATCC 51198, Haloterrigena turkmenica DSM 5511, Haloterrigena turkmenica str. DSM 5511, Haloterrigena turkmenica strain DSM 5511
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