STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR78613.1Cation diffusion facilitator family transporter. (313 aa)    
Predicted Functional Partners:
SDR78810.1
Multisubunit sodium/proton antiporter, MrpA subunit /multisubunit sodium/proton antiporter, MrpB subunit.
     
 0.488
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.480
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.480
SDR78649.1
Multisubunit sodium/proton antiporter, MrpG subunit.
       0.451
SDR78672.1
Multisubunit sodium/proton antiporter, MrpF subunit.
       0.451
SDR78703.1
Multisubunit sodium/proton antiporter, MrpE subunit.
       0.451
SDR78739.1
Multisubunit sodium/proton antiporter, MrpD subunit.
       0.451
SDR78771.1
Multisubunit sodium/proton antiporter, MrpC subunit.
       0.451
SDS39790.1
Hemolysin, contains CBS domains.
 
      0.439
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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