Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gpr | spoIIGA | BMQ_4571 | BMQ_4271 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | 0.697 |
| gpr | spoIIIAD | BMQ_4571 | BMQ_4467 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Stage III sporulation protein AD. | 0.772 |
| gpr | spoIIIAE | BMQ_4571 | BMQ_4466 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Stage III sporulation protein AE. | 0.771 |
| gpr | spoIIIAG | BMQ_4571 | BMQ_4464 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Stage III sporulation protein AG. | 0.769 |
| gpr | spoIIID | BMQ_4571 | BMQ_5141 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Sporulation transcriptional regulator SpoIIID. | 0.771 |
| gpr | spoIIR | BMQ_4571 | BMQ_5167 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Stage II sporulation protein R. | 0.773 |
| gpr | ylbJ | BMQ_4571 | BMQ_4298 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Sporulation integral membrane protein YlbJ. | 0.772 |
| gpr | ymxH | BMQ_4571 | BMQ_4142 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Sporulation protein YmxH. | 0.729 |
| gpr | yqfC | BMQ_4571 | BMQ_4555 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Sporulation protein YqfC. | 0.743 |
| gpr | yqfD | BMQ_4571 | BMQ_4554 | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | Stage IV sporulation protein YqfD. | 0.792 |
| spoIIGA | gpr | BMQ_4271 | BMQ_4571 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination. | 0.697 |
| spoIIGA | spoIIIAD | BMQ_4271 | BMQ_4467 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Stage III sporulation protein AD. | 0.768 |
| spoIIGA | spoIIIAE | BMQ_4271 | BMQ_4466 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Stage III sporulation protein AE. | 0.786 |
| spoIIGA | spoIIIAG | BMQ_4271 | BMQ_4464 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Stage III sporulation protein AG. | 0.760 |
| spoIIGA | spoIIID | BMQ_4271 | BMQ_5141 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Sporulation transcriptional regulator SpoIIID. | 0.731 |
| spoIIGA | spoIIR | BMQ_4271 | BMQ_5167 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Stage II sporulation protein R. | 0.847 |
| spoIIGA | ylbJ | BMQ_4271 | BMQ_4298 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Sporulation integral membrane protein YlbJ. | 0.808 |
| spoIIGA | ymxH | BMQ_4271 | BMQ_4142 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Sporulation protein YmxH. | 0.717 |
| spoIIGA | yqfC | BMQ_4271 | BMQ_4555 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Sporulation protein YqfC. | 0.792 |
| spoIIGA | yqfD | BMQ_4271 | BMQ_4554 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR (By similarity). | Stage IV sporulation protein YqfD. | 0.772 |
page 1 of 6