STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpDPutative V-type ATP synthase subunit D (V-type ATPase subunit D); Produces ATP from ADP in the presence of a proton gradient across the membrane. (224 aa)    
Predicted Functional Partners:
atpI
Putative V-type ATP synthase subunit I; putative membrane protein; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
atpP
Putative H+-transporting two-sector ATPase, C subunit.
 
 0.999
atpE
Putative V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpC
Putative V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpF
Putative V-type ATP synthase subunit F.
  
 0.999
atpA
Putative V-type ATP synthase alpha chain (V-type ATPase subunit A); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpB
Putative V-type ATP synthase beta chain (V-type ATPase subunit B); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.999
ACO44893.2
Putative Vacuolar type ATP synthase subunit.
   
 0.982
ACO47078.1
Putative inorganic diphosphatase (pyrophosphate phosphohydrolase).
     
  0.900
ACO45653.2
Putative naringenin-chalcone synthase.
    
 0.462
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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