Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO46250.1 | ACO46251.1 | Deide_13140 | Deide_13141 | Hypothetical protein. | Putative ribonuclease SA. | 0.953 |
ACO46250.1 | ACO46252.1 | Deide_13140 | Deide_13150 | Hypothetical protein. | Hypothetical protein. | 0.840 |
ACO46250.1 | ACO46254.1 | Deide_13140 | Deide_13170 | Hypothetical protein. | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | 0.488 |
ACO46250.1 | uppP | Deide_13140 | Deide_13160 | Hypothetical protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.673 |
ACO46251.1 | ACO46250.1 | Deide_13141 | Deide_13140 | Putative ribonuclease SA. | Hypothetical protein. | 0.953 |
ACO46251.1 | ACO46252.1 | Deide_13141 | Deide_13150 | Putative ribonuclease SA. | Hypothetical protein. | 0.840 |
ACO46251.1 | ACO46254.1 | Deide_13141 | Deide_13170 | Putative ribonuclease SA. | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | 0.554 |
ACO46251.1 | uppP | Deide_13141 | Deide_13160 | Putative ribonuclease SA. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.645 |
ACO46252.1 | ACO46250.1 | Deide_13150 | Deide_13140 | Hypothetical protein. | Hypothetical protein. | 0.840 |
ACO46252.1 | ACO46251.1 | Deide_13150 | Deide_13141 | Hypothetical protein. | Putative ribonuclease SA. | 0.840 |
ACO46252.1 | ACO46254.1 | Deide_13150 | Deide_13170 | Hypothetical protein. | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | 0.487 |
ACO46252.1 | uppP | Deide_13150 | Deide_13160 | Hypothetical protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.767 |
ACO46254.1 | ACO46250.1 | Deide_13170 | Deide_13140 | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | Hypothetical protein. | 0.488 |
ACO46254.1 | ACO46251.1 | Deide_13170 | Deide_13141 | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | Putative ribonuclease SA. | 0.554 |
ACO46254.1 | ACO46252.1 | Deide_13170 | Deide_13150 | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | Hypothetical protein. | 0.487 |
ACO46254.1 | rpsB | Deide_13170 | Deide_13180 | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | Putative 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.460 |
ACO46254.1 | uppP | Deide_13170 | Deide_13160 | Putative Streptomycin 3'-kinase (Streptomycin 3'-phosphotransferase). | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.558 |
ACO47120.2 | glmU | Deide_20950 | Deide_07500 | Putative glutamate synthase, large subunit. | Putative bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.534 |
ACO47120.2 | rpsB | Deide_20950 | Deide_13180 | Putative glutamate synthase, large subunit. | Putative 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.622 |
ACO47120.2 | uppP | Deide_20950 | Deide_13160 | Putative glutamate synthase, large subunit. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.534 |
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