STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO47181.1Putative serine protease, precursor. (366 aa)    
Predicted Functional Partners:
ACO47180.1
Hypothetical protein.
  
    0.841
ACO47182.2
Putative Deoxyguanosine kinase (Deoxynucleoside kinase complex I F-component).
       0.738
ACO47183.1
Putative Deoxyadenosine kinase (Deoxynucleoside kinase complex I S-component).
       0.666
ACO47179.1
Putative methionine gamma-lyase (L-methioninase).
  
    0.531
ACO47208.2
Putative 5-formyltetrahydrofolate cyclo-ligase family protein.
 
     0.530
rplT
Putative 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
   0.526
ACO44955.1
Putative adenylate/guanylate cyclase.
  
  
 0.492
ACO46247.1
Hypothetical protein, precursor.
  
 
 0.481
murE
Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
    0.457
ACO46460.1
Putative Mov34/MPN/PAD-1 family protein.
   
  0.452
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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