STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTQ2-1ERF1 methyltransferase catalytic subunit MTQ2. (256 aa)    
Predicted Functional Partners:
rmt-1
Multifunctional methyltransferase subunit trm112.
    
 0.999
CTRI78_v001850
Putative peptide chain release factor 1.
  
 
 0.986
SU2
Eukaryotic peptide chain release factor subunit 1.
    
 0.879
hem13
Putative oxygen-dependent coproporphyrinogen-III oxidase.
   
 
 0.820
CTRI78_v005219
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.818
eth-1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.805
sup35
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 0.734
CTRI78_v003341
ATP synthase subunit 5.
  
   0.717
CTRI78_v007816
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
   0.696
CTRI78_v011443
ATP synthase subunit delta.
  
   0.678
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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