STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v011904Uncharacterized protein. (214 aa)    
Predicted Functional Partners:
CTRI78_v005457
Hydroxyacid-oxoacid transhydrogenase.
  
 0.764
macA
Maleylacetate reductase 1.
  
 0.687
CTRI78_v002398
Uncharacterized protein.
  
 0.687
MCM1
Transcription factor of morphogenesis MCM1.
    
 0.673
CTRI78_v007973
Uncharacterized protein.
   
 
 0.605
mdlC
Benzoylformate decarboxylase; Belongs to the TPP enzyme family.
   
 
 0.542
xylB-1
Aryl-alcohol dehydrogenase.
    
  0.542
FDH1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
  0.542
xylB-0
Aryl-alcohol dehydrogenase.
    
  0.542
adh-0
Alcohol dehydrogenase.
    
  0.531
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.