STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v008952Putative transcriptional regulatory protein. (702 aa)    
Predicted Functional Partners:
cot-3
Elongation factor 2.
    
  0.692
SDL1
L-serine dehydratase.
  
 0.624
CTRI78_v008025
Putative threonine dehydratase.
  
 0.576
CTRI78_v008568
Threonine dehydratase.
  
 0.576
CTRI78_v000470
Acetolactate synthase small subunit.
    
  0.565
CTRI78_v004955
Ceramide glucosyltransferase.
  
 0.560
srr
Putative serine racemase.
  
 0.560
trp-1
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.554
CTRI78_v002831
Acetolactate synthase.
    
  0.554
alsS
Acetolactate synthase; Belongs to the TPP enzyme family.
    
  0.554
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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