STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eglD-1Putative endo-beta-1,4-glucanase D. (237 aa)    
Predicted Functional Partners:
NEW1
[NU+] prion formation protein 1.
    
   0.722
NUP152
Nucleoporin NUP152.
    
  0.686
GLE1
Nucleoporin GLE1.
    
  0.672
ASF1
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.670
TEF3
Elongation factor 3.
    
   0.648
HIR1
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
  0.597
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.552
NUP159
Nucleoporin NUP159.
    
  0.545
CTRI78_v009119
37S ribosomal protein S8.
   
   0.539
crp-27
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
   
   0.539
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.