STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v007921Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
GAL83
SNF1 protein kinase subunit beta-3.
    
 0.665
MDG1
Signal transduction protein MDG1.
    
 0.665
SDS23
Protein SDS23; Involved in DNA replication and cell separation. Belongs to the SDS23 family.
   
 0.643
SNF4
5'-AMP-activated protein kinase subunit gamma.
   
 0.643
CTRI78_v005013
Uncharacterized protein.
   
 0.643
Cetn1
Centrin-1.
    
 0.637
mip1
Target of rapamycin complex 1 subunit mip1.
    
 0.622
mug70
Meiotically up-regulated gene 70 protein.
   
 0.615
ATG1
Serine/threonine-protein kinase ATG1.
    
 0.593
rrp6
Exosome complex exonuclease rrp6.
    
 0.563
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.