STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hus1Checkpoint protein; Belongs to the HUS1 family. (349 aa)    
Predicted Functional Partners:
WRN
Werner syndrome ATP-dependent helicase.
    
 0.991
rad9-0
DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.
  
 
 0.988
Rad17
Cell cycle checkpoint protein RAD17.
   
 0.978
RFC2
Replication factor C subunit 2.
   
 0.972
rfc4
Replication factor C subunit 4.
    
 0.963
CTRI78_v000587
Replication factor C subunit 5.
    
 0.960
Rad1
Cell cycle checkpoint protein RAD1.
    
 0.958
CTRI78_v003196
Uncharacterized protein.
    
 0.958
RFC3
Replication factor C subunit 3.
   
 0.955
rad3
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
   
 0.896
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.